Transcript: MGP_C57BL6NJ_T0061310.1

Description

doublecortin-like kinase 1 [Source:MGI Symbol;Acc:MGI:1330861]

Gene Synonyms

1700113D08Rik, 2810480F11Rik, AI836758, CPG16, Click-I, Cpg16, DCLK, Dcamkl1, Dcamkl1 {ECO:0000313|EMBL:EDL35301.1,GN ECO:0000313|MGI:MGI:1330861}, Dcamkl1GN, Dcl, Dclk, ania-4, mKIAA0369

Location

Chromosome 3: 56,244,605-56,254,199 forward strand.

Reference strain equivalent

Dclk1

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features and maps to 225 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0027642.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0061305.1	-	7846	756aa	MGP_C57BL6NJ_P0061305	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0061303.1	-	7961	739aa	MGP_C57BL6NJ_P0061303	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17359, CCDS50909, CCDS50910, CCDS79908, CCDS79909	A0A0G2JE54 A0A0G2JEN4 A0A0G2JGH1 A0A0G2JGQ6 A0A0G2JGR9 A8IP62 H7BX36 Q1EDH1 Q80VB6 Q8CCN4 Q9JLM8	-
MGP_C57BL6NJ_T0061311.1	-	7011	422aa	MGP_C57BL6NJ_P0061311	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061304.1	-	6025	363aa	MGP_C57BL6NJ_P0061304	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061310.1	-	5196	56aa	MGP_C57BL6NJ_P0061310	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061314.1	-	4315	449aa	MGP_C57BL6NJ_P0061314	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061312.1	-	4282	432aa	MGP_C57BL6NJ_P0061312	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061313.1	-	2922	421aa	MGP_C57BL6NJ_P0061313	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061316.1	-	1662	452aa	MGP_C57BL6NJ_P0061316	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061315.1	-	1499	382aa	MGP_C57BL6NJ_P0061315	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061306.1	-	1013	247aa	MGP_C57BL6NJ_P0061306	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0061318.1	-	906	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0061308.1	-	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0061309.1	-	1402	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0061307.1	-	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 5,196 bps, Translation length: 56 residues

Version

MGP_C57BL6NJ_T0061310.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0061310.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_C57BL6NJ_T0061310.1

Summary

About Us

Get help

Our sister sites

Follow us