Transcript: MGP_C57BL6NJ_T0044574.1

Description

RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein [Source:MGI Symbol;Acc:MGI:1915160]

Gene Synonyms

1700021K19Rik, 5330403K09, Kiaa0226, Rubicon, mKIAA0226

Location

Chromosome 16: 31,603,503-31,618,630 reverse strand.

Reference strain equivalent

Rubcn

About this transcript

This transcript has 12 exons and maps to 161 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0023163.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0044571.1	-	5311	956aa	MGP_C57BL6NJ_P0044571	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0044569.1	-	5297	941aa	MGP_C57BL6NJ_P0044569	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28124, CCDS49832	D3Z7B1 Q80U62	-
MGP_C57BL6NJ_T0044573.1	-	5257	941aa	MGP_C57BL6NJ_P0044573	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0044572.1	-	5098	949aa	MGP_C57BL6NJ_P0044572	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0044577.1	-	404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0044570.1	-	2982	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0044574.1	-	2301	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0044575.1	-	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0044576.1	-	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 2,301 bps,

Version

MGP_C57BL6NJ_T0044574.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0044574.1

Summary

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Transcript: MGP_C57BL6NJ_T0044574.1

Summary

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