Transcript: MGP_C57BL6NJ_T0024617.1

Description

centromere protein F [Source:MGI Symbol;Acc:MGI:1313302]

Gene Synonyms

6530404A22Rik, AI325968, CENF, Lek1, PRO1779, mitosin

Location

Chromosome 1: 202,877,265-202,881,474 reverse strand.

Reference strain equivalent

Cenpf

About this transcript

This transcript has 4 exons and maps to 37 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0017328.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0024613.1	-	11130	2997aa	MGP_C57BL6NJ_P0024613	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35820	E9PY14 E9Q3P4 E9Q776 F6V6F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0024615.1	-	3001	952aa	MGP_C57BL6NJ_P0024615	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0024614.1	-	358	118aa	MGP_C57BL6NJ_P0024614	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0024617.1	-	609	88aa	MGP_C57BL6NJ_P0024617	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0024616.1	-	3389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024618.1	-	1027	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 609 bps, Translation length: 88 residues

Version

MGP_C57BL6NJ_T0024617.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0024617.1

Summary

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Transcript: MGP_C57BL6NJ_T0024617.1

Summary

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