Transcript: MGP_C57BL6NJ_T0020215.1

Description

inositol polyphosphate-1-phosphatase [Source:MGI Symbol;Acc:MGI:104848]

Gene Synonyms

2300002C06Rik, AV137389

Location

Chromosome 1: 54,504,353-54,514,173 reverse strand.

Reference strain equivalent

Inpp1

About this transcript

This transcript has 4 exons and maps to 164 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0016401.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0020214.1	-	5550	396aa	MGP_C57BL6NJ_P0020214	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14947	E0CX64 E0CYQ4 H3BK26 P49442	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0020219.1	-	541	80aa	MGP_C57BL6NJ_P0020219	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0020217.1	-	376	90aa	MGP_C57BL6NJ_P0020217	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0020215.1	-	1130	110aa	MGP_C57BL6NJ_P0020215	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0020216.1	-	916	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0020218.1	-	425	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 1,130 bps, Translation length: 110 residues

Version

MGP_C57BL6NJ_T0020215.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0020215.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_C57BL6NJ_T0020215.1

Summary

About Us

Get help

Our sister sites

Follow us