Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Lrrc42 MGP_C57BL6NJ_G0028957

.

Description

leucine rich repeat containing 42 [Source:MGI Symbol;Acc:MGI:1925059]

Gene Synonyms

A930011F22Rik, AA536996

Location

Chromosome 4: 111,788,775-111,811,969 reverse strand.

C57BL_6NJ_v1:CM004218.1

Reference strain equivalent

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0067171.1	-	1786	421aa	MGP_C57BL6NJ_P0067171	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS18434	D3Z416 F6UPZ3 Q8R2U7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0067175.1	-	411	118aa	MGP_C57BL6NJ_P0067175	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0067174.1	-	344	114aa	MGP_C57BL6NJ_P0067174	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0067172.1	-	1195	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0067173.1	-	407	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

.

Summary

.

.