Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
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Genetic Variation
- Variant table
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- Structural variants
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Regulation
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Supporting evidence
ID History
- Gene history

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Gene: Syngr2 MGP_C57BL6NJ_G0019845

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Description

synaptogyrin 2 [Source:MGI Symbol;Acc:MGI:1328324]

Gene Synonyms

Clast2, cellugyrin

Location

Chromosome 11: 125,817,903-125,822,502 forward strand.

C57BL_6NJ_v1:CM004225.1

Reference strain equivalent

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0034252.1	-	1492	224aa	MGP_C57BL6NJ_P0034252	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0034251.1	-	1402	194aa	MGP_C57BL6NJ_P0034251	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0034253.1	-	512	119aa	MGP_C57BL6NJ_P0034253	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0034250.1	-	449	46aa	MGP_C57BL6NJ_P0034250	Nonsense mediated decay	CCDS25691	B0QZP8 H3BIZ8 H3BJ78 H3BJY1 H3BKU5 O55101	-
MGP_C57BL6NJ_T0034254.1	-	330	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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