Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Vamp4 MGP_C57BL6NJ_G0017063

.

Description

vesicle-associated membrane protein 4 [Source:MGI Symbol;Acc:MGI:1858730]

Gene Synonyms

D1Ertd147e

Location

Chromosome 1: 173,563,960-173,594,715 forward strand.

C57BL_6NJ_v1:CM004215.1

Reference strain equivalent

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0023500.1	-	6074	141aa	MGP_C57BL6NJ_P0023500	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0023498.1	-	2752	141aa	MGP_C57BL6NJ_P0023498	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15421	A0A0A6YY66 O70480 Q8BSN6	-
MGP_C57BL6NJ_T0023501.1	-	2532	141aa	MGP_C57BL6NJ_P0023501	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023502.1	-	830	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0023499.1	-	682	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

.

Summary

.

.