Transcript: MGP_C3HHeJ_T0044361.1

Description

activated leukocyte cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1313266]

Gene Synonyms

AI853494, BEN, CD166, DM-GRASP, MuSC, SC1, musc

Location

Chromosome 16: 50,713,325-50,904,233 reverse strand.

Reference strain equivalent

Alcam

About this transcript

This transcript has 14 exons, is annotated with 24 domains and features and maps to 93 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0022608.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C3HHeJ_T0044356.1	-	6053	583aa	MGP_C3HHeJ_P0044356	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37356	E9Q3Q6 E9Q4G8 F6QH25 Q54AJ5 Q5MPX5 Q61490	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C3HHeJ_T0044358.1	-	1917	570aa	MGP_C3HHeJ_P0044358	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0044361.1	-	1885	555aa	MGP_C3HHeJ_P0044361	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0044357.1	-	1621	344aa	MGP_C3HHeJ_P0044357	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0044362.1	-	878	133aa	MGP_C3HHeJ_P0044362	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0044360.1	-	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0044359.1	-	439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,885 bps, Translation length: 555 residues

Version

MGP_C3HHeJ_T0044361.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C3HHeJ_T0044361.1

Summary

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Transcript: MGP_C3HHeJ_T0044361.1

Summary

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