Transcript: MGP_BALBcJ_T0084826.1

Description

transmembrane 6 superfamily member 1 [Source:MGI Symbol;Acc:MGI:1933209]

Gene Synonyms

AI428514, BC023123, C630016D09Rik

Location

Chromosome 7: 81,620,348-81,646,068 forward strand.

Reference strain equivalent

Tm6sf1

About this transcript

This transcript has 8 exons and maps to 250 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0032429.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0084823.1	-	2230	370aa	MGP_BALBcJ_P0084823	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21408, CCDS80744	D3YX52 D6RD09 P58749	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0084828.1	-	1066	279aa	MGP_BALBcJ_P0084828	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0084826.1	-	2255	161aa	MGP_BALBcJ_P0084826	Nonsense mediated decay		-	-
MGP_BALBcJ_T0084825.1	-	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0084824.1	-	3419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0084829.1	-	2094	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0084830.1	-	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0084827.1	-	984	327aa	MGP_BALBcJ_P0084827	Unknown likely coding		-	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 2,255 bps, Translation length: 161 residues

Version

MGP_BALBcJ_T0084826.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0084826.1

Summary

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Transcript: MGP_BALBcJ_T0084826.1

Summary

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