Transcript: MGP_BALBcJ_T0084730.1

Description

Bloom syndrome, RecQ helicase-like [Source:MGI Symbol;Acc:MGI:1328362]

Location

Chromosome 7: 80,188,762-80,234,852 reverse strand.

Reference strain equivalent

Blm

About this transcript

This transcript has 15 exons and maps to 156 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0032407.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0084725.1	-	4770	1419aa	MGP_BALBcJ_P0084725	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0084724.1	-	4598	1416aa	MGP_BALBcJ_P0084724	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0084723.1	-	1362	181aa	MGP_BALBcJ_P0084723	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40000, CCDS52281	A0A0U1RNI0 A0A0U1RPP0 A0A0U1RPS3 E9PZ97 O88700	-
MGP_BALBcJ_T0084729.1	-	465	50aa	MGP_BALBcJ_P0084729	Nonsense mediated decay		-	-
MGP_BALBcJ_T0084728.1	-	383	41aa	MGP_BALBcJ_P0084728	Nonsense mediated decay		-	-
MGP_BALBcJ_T0084726.1	-	538	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0084730.1	-	3582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0084731.1	-	2507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0084732.1	-	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0084727.1	-	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 15, Coding exons: 0, Transcript length: 3,582 bps,

Version

MGP_BALBcJ_T0084730.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0084730.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_BALBcJ_T0084730.1

Summary

About Us

Get help

Our sister sites

Follow us