Description
regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]
Location
Chromosome 3: 92,455,561-92,463,044 forward strand.
BALB_cJ_v1:CM004196.1
Reference strain equivalent
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_BALBcJ_T0062224.1 | - | 4333 | 658aa | MGP_BALBcJ_P0062224 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, | |
| MGP_BALBcJ_T0062230.1 | - | 4450 | 303aa | MGP_BALBcJ_P0062230 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062233.1 | - | 4367 | 303aa | MGP_BALBcJ_P0062233 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062238.1 | - | 4189 | 658aa | MGP_BALBcJ_P0062238 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062223.1 | - | 2355 | 658aa | MGP_BALBcJ_P0062223 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS17598 | D3YTK4 D3YVW1 D3YZK7 D3Z0D4 D6RDE5 K4DI79 Q6DI69 Q9JL61 | - |
| MGP_BALBcJ_T0062237.1 | - | 2350 | 658aa | MGP_BALBcJ_P0062237 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062234.1 | - | 882 | 181aa | MGP_BALBcJ_P0062234 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062236.1 | - | 565 | 105aa | MGP_BALBcJ_P0062236 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062226.1 | - | 538 | 90aa | MGP_BALBcJ_P0062226 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062235.1 | - | 536 | 95aa | MGP_BALBcJ_P0062235 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062225.1 | - | 486 | 131aa | MGP_BALBcJ_P0062225 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_BALBcJ_T0062227.1 | - | 4014 | 41aa | MGP_BALBcJ_P0062227 | Nonsense mediated decay | - | - | |
| MGP_BALBcJ_T0062229.1 | - | 705 | 41aa | MGP_BALBcJ_P0062229 | Nonsense mediated decay | - | - | |
| MGP_BALBcJ_T0062231.1 | - | 525 | 41aa | MGP_BALBcJ_P0062231 | Nonsense mediated decay | - | - | |
| MGP_BALBcJ_T0062228.1 | - | 346 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_BALBcJ_T0062232.1 | - | 4139 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_BALBcJ_T0062239.1 | - | 680 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
