Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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Supporting evidence
ID History
- Gene history

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Gene: Vim MGP_BALBcJ_G0025330

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Description

vimentin [Source:MGI Symbol;Acc:MGI:98932]

Location

Chromosome 2: 10,653,438-10,662,328 forward strand.

BALB_cJ_v1:CM004195.1

Reference strain equivalent

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0052604.1	-	2193	466aa	MGP_BALBcJ_P0052604	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0052605.1	-	1777	427aa	MGP_BALBcJ_P0052605	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0052603.1	-	574	134aa	MGP_BALBcJ_P0052603	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15696	A0A0A6YWC8 A2AKJ2 P20152 Q5FWJ3	-
MGP_BALBcJ_T0052607.1	-	2926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0052606.1	-	926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0052608.1	-	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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