Transcript: MGP_129S1SvImJ_T0035082.1

Description

RIKEN cDNA 4930447C04 gene [Source:MGI Symbol;Acc:MGI:1923051]

Gene Synonyms

4921504I02Rik, A930035O15Rik, Six6OS, Six6as, Six6os1

Location

Chromosome 12: 72,753,144-72,767,398 reverse strand.

Reference strain equivalent

4930447C04Rik

About this transcript

This transcript has 6 exons and maps to 66 oligo probes.

Gene

This transcript is a product of gene MGP_129S1SvImJ_G0019830.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_129S1SvImJ_T0035078.1	-	1769	521aa	MGP_129S1SvImJ_P0035078	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25971	D3YUI5 D3YZ78 D3Z202 F7BAS9 F8WHJ9 Q9CTN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_129S1SvImJ_T0035084.1	-	1970	88aa	MGP_129S1SvImJ_P0035084	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0035079.1	-	1887	519aa	MGP_129S1SvImJ_P0035079	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0035086.1	-	793	143aa	MGP_129S1SvImJ_P0035086	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0035085.1	-	639	107aa	MGP_129S1SvImJ_P0035085	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0035080.1	-	460	70aa	MGP_129S1SvImJ_P0035080	Nonsense mediated decay		-	-
MGP_129S1SvImJ_T0035082.1	-	423	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0035081.1	-	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_129S1SvImJ_T0035083.1	-	676	203aa	MGP_129S1SvImJ_P0035083	Unknown likely coding		-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 423 bps,

Version

MGP_129S1SvImJ_T0035082.1

Type

Processed transcript

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_129S1SvImJ_T0035082.1

Summary

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Transcript: MGP_129S1SvImJ_T0035082.1

Summary

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