Description

TAR DNA binding protein [Source:MGI Symbol;Acc:MGI:2387629]

Synonyms

TDP-43, Tdp43, 1190002A23Rik

About this transcript

This transcript has 6 exons, is annotated with 21 domains and features, is associated with 11 variations and maps to 494 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Tardbp-202ENSMUST00000084125.97477414aaENSMUSP00000081142
 
Protein coding
CCDS38971Q544R5 Q921F2 NM_001305425
NM_145556
NP_001292354
NP_663531
NR_131120
TSL:1GENCODE basicAPPRIS P1
Tardbp-210ENSMUST00000172073.76513304aaENSMUSP00000130963
 
Protein coding
CCDS38968Q6VYI4 NM_001008545
NP_001008545
TSL:5GENCODE basic
Tardbp-209ENSMUST00000165113.76495298aaENSMUSP00000129342
 
Protein coding
CCDS38969Q8BLD4 NM_001003898
NM_001003899
NP_001003898
NP_001003899
NR_027864
TSL:5GENCODE basic
Tardbp-206ENSMUST00000105702.86425302aaENSMUSP00000101327
 
Protein coding
CCDS38967Q6VYI5 NM_001008546
NP_001008546
TSL:5GENCODE basic
Tardbp-204ENSMUST00000105699.71904295aaENSMUSP00000101324
 
Protein coding
CCDS38970Q8R0B4 -TSL:1GENCODE basic
Tardbp-223ENSMUST00000189048.61096298aaENSMUSP00000140364
 
Protein coding
CCDS38969Q8BLD4 -TSL:1GENCODE basic
Tardbp-203ENSMUST00000095719.91011304aaENSMUSP00000093386
 
Protein coding
CCDS38968Q6VYI4 -TSL:1GENCODE basic
Tardbp-205ENSMUST00000105700.7923302aaENSMUSP00000101325
 
Protein coding
CCDS38967Q6VYI5 -TSL:1GENCODE basic
Tardbp-216ENSMUST00000186947.6818243aaENSMUSP00000140529
 
Protein coding
-A0A087WR97 -CDS 3' incompleteTSL:5
Tardbp-214ENSMUST00000186711.181419aaENSMUSP00000140057
 
Protein coding
-A0A087WQ63 -CDS 5' incompleteTSL:3
Tardbp-227ENSMUST00000190630.674885aaENSMUSP00000140385
 
Protein coding
-A0A087WQX8 -CDS 5' incompleteTSL:2
Tardbp-211ENSMUST00000185673.1740149aaENSMUSP00000141010
 
Protein coding
-A0A087WSE4 -CDS 3' incompleteTSL:5
Tardbp-212ENSMUST00000185824.6709200aaENSMUSP00000140110
 
Protein coding
-A0A087WQA5 -CDS 5' incompleteTSL:5
Tardbp-218ENSMUST00000187939.6570128aaENSMUSP00000140928
 
Protein coding
-A0A087WS74 -CDS 5' incompleteTSL:5
Tardbp-221ENSMUST00000188488.152999aaENSMUSP00000140989
 
Protein coding
-A0A087WSC6 -CDS 5' incompleteTSL:5
Tardbp-201ENSMUST00000045180.132006298aaENSMUSP00000038113
 
Nonsense mediated decay
CCDS38969Q8BLD4 -TSL:1
Tardbp-219ENSMUST00000188134.61773298aaENSMUSP00000139476
 
Nonsense mediated decay
CCDS38969Q8BLD4 -TSL:5
Tardbp-228ENSMUST00000190696.6141184aaENSMUSP00000139637
 
Nonsense mediated decay
-A0A087WP57 -TSL:5
Tardbp-230ENSMUST00000191450.61304285aaENSMUSP00000140832
 
Nonsense mediated decay
-A0A087WRZ5 -TSL:5
Tardbp-208ENSMUST00000147391.2101135aaENSMUSP00000140333
 
Nonsense mediated decay
-A0A087WQT4 -CDS 5' incompleteTSL:2
Tardbp-207ENSMUST00000140897.7781140aaENSMUSP00000135135
 
Nonsense mediated decay
-H3BJV1 -CDS 5' incompleteTSL:5
Tardbp-226ENSMUST00000190552.6741175aaENSMUSP00000141052
 
Nonsense mediated decay
-A0A087WSH7 -CDS 5' incompleteTSL:5
Tardbp-229ENSMUST00000191378.6684138aaENSMUSP00000140718
 
Nonsense mediated decay
-A0A087WRP4 -CDS 5' incompleteTSL:5
Tardbp-215ENSMUST00000186729.667688aaENSMUSP00000139547
 
Nonsense mediated decay
-A0A087WNY6 -CDS 5' incompleteTSL:5
Tardbp-224ENSMUST00000190287.151778aaENSMUSP00000140859
 
Nonsense mediated decay
-A0A087WS17 -CDS 5' incompleteTSL:5
Tardbp-222ENSMUST00000189041.1908No protein-
 
Processed transcript
---TSL:5
Tardbp-220ENSMUST00000188380.1731No protein-
 
Processed transcript
---TSL:5
Tardbp-217ENSMUST00000187937.1629No protein-
 
Processed transcript
---TSL:5
Tardbp-213ENSMUST00000186317.1358No protein-
 
Processed transcript
---TSL:5
Tardbp-225ENSMUST00000190478.1370No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 6, Coding exons: 5, Transcript length: 7,477 bps, Translation length: 414 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38971

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q921F2

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000084125.9

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays