Transcript: ENSMUST00000165519.2 Zc3h12c-201

Description

zinc finger CCCH type containing 12C [Source:MGI Symbol;Acc:MGI:3026959]

Gene Synonyms

C230027N18Rik

Location

Chromosome 9: 52,023,285-52,079,411 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 2661 variant alleles and maps to 268 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000035164.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000165519.2	Zc3h12c-201	6133	903aa	ENSMUSP00000127603.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52794	E9Q1I3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000213645.2	Zc3h12c-202	6764	884aa	ENSMUSP00000150821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5DTV4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 6,133 bps, Translation length: 903 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52794

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000165519.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000165519.2 Zc3h12c-201

Summary

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Transcript: ENSMUST00000165519.2 Zc3h12c-201

Summary

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