Transcript: ENSMUST00000137168.3 Gm42890-201

Description

predicted gene 42890 [Source:MGI Symbol;Acc:MGI:5663027]

Location

Chromosome 3: 105,873,431-105,883,727 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1051 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000105852.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000167642.8	Gm42890-202	2566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000137168.3	Gm42890-201	1580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,580 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000137168.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000137168.3 Gm42890-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000137168.3 Gm42890-201

Summary

About Us

Get help

Our sister sites

Follow us