Transcript: ENSMUST00000235950.2 Vmn1r191-202

Description

vomeronasal 1 receptor 191 [Source:MGI Symbol;Acc:MGI:2182258]

Gene Synonyms

V1rh15

Location

Chromosome 13: 22,357,390-22,368,139 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 1173 variant alleles and maps to 147 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000095916.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000237107.2	Vmn1r191-203	7551	298aa	ENSMUSP00000158004.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49218	Q8K4D0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000072369.2	Vmn1r191-201	897	298aa	ENSMUSP00000072206.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49218	Q8K4D0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000235950.2	Vmn1r191-202	5400	298aa	ENSMUSP00000158274.2	Nonsense mediated decay	CCDS49218	Q8K4D0	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 5,400 bps, Translation length: 298 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49218

Version

ENSMUST00000235950.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported only

Transcript: ENSMUST00000235950.2 Vmn1r191-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000235950.2 Vmn1r191-202

Summary

About Us

Get help

Our sister sites

Follow us