Transcript: ENSMUST00000223967.2 Tcstv3-202

Description

2-cell-stage, variable group, member 3 [Source:MGI Symbol;Acc:MGI:2675349]

Gene Synonyms

clone L3

Location

Chromosome 13: 120,778,414-120,779,714 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 756 variant alleles and maps to 198 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000095821.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000223967.2	Tcstv3-202	779	169aa	ENSMUSP00000153496.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56911	O70518	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000178349.2	Tcstv3-201	510	169aa	ENSMUSP00000137396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56911	O70518	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 779 bps, Translation length: 169 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS56911

Version

ENSMUST00000223967.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000223967.2 Tcstv3-202

Summary

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Transcript: ENSMUST00000223967.2 Tcstv3-202

Summary

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