Transcript: ENSMUST00000249538.1 Gm7995-202

Description

predicted gene 7995 [Source:MGI Symbol;Acc:MGI:3779776]

Gene Synonyms

Gm3586

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 847 variant alleles and maps to 379 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000249538.1	Gm7995-202	1365	177aa	ENSMUSP00000159783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000249540.1	Gm7995-204	2296	134aa	ENSMUSP00000159784.1	Nonsense mediated decay	-
ENSMUST00000249539.1	Gm7995-203	2992	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-
ENSMUST00000249537.1	Gm7995-201	1019	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,365 bps, Translation length: 177 residues

Version

ENSMUST00000249538.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.