Transcript: ENSMUST00000226595.2 Gm4181-202

Description

predicted gene 4181 [Source:MGI Symbol;Acc:MGI:3782357]

Location

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 1036 variant alleles and maps to 299 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000170249.2	Gm4181-201	898	184aa	ENSMUSP00000130101.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9Q7X3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000226595.2	Gm4181-202	760	59aa	ENSMUSP00000153949.2	Nonsense mediated decay		A0A2I3BQ69	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 760 bps, Translation length: 59 residues

Version

ENSMUST00000226595.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.