Transcript: ENSMUST00000238521.2 Cfap92-202

Description

cilia and flagella associated protein 92 [Source:MGI Symbol;Acc:MGI:3586838]

Gene Synonyms

1810020O05Rik

Location

About this transcript

This transcript has 16 exons, is annotated with 13 domains and features, is associated with 2771 variant alleles and maps to 164 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000238521.2	Cfap92-202	3678	1158aa	ENSMUSP00000158817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BDQ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000162547.3	Cfap92-201	1637	400aa	ENSMUSP00000158660.2	Nonsense mediated decay		A0A571BED7	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,678 bps, Translation length: 1,158 residues

Version

ENSMUST00000238521.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.