Transcript: ENSMUST00000236919.2 Vmn1r168-203

Description

vomeronasal 1 receptor 168 [Source:MGI Symbol;Acc:MGI:3704286]

Gene Synonyms

Gm10659

Location

Chromosome 7: 23,239,157-23,246,873 forward strand.

About this transcript

This transcript has 2 exons, is associated with 981 variant alleles and maps to 15 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000074291.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000098704.3	Vmn1r168-201	930	309aa	ENSMUSP00000096301.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52131	K7N6B6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000235361.2	Vmn1r168-202	6704	252aa	ENSMUSP00000157979.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BA81	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000236919.2	Vmn1r168-203	5830	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 5,830 bps,

Version

ENSMUST00000236919.2

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported only

Transcript: ENSMUST00000236919.2 Vmn1r168-203

Summary

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Transcript: ENSMUST00000236919.2 Vmn1r168-203

Summary

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