Transcript: ENSMUST00000125960.2 5330416C01Rik-202

Description

RIKEN cDNA 5330416C01 gene [Source:MGI Symbol;Acc:MGI:2685378]

Location

Chromosome 13: 97,871,855-97,879,629 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 828 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000054944.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000144993.2	5330416C01Rik-203	3287	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000125960.2	5330416C01Rik-202	747	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000123535.2	5330416C01Rik-201	564	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 747 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000125960.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000125960.2 5330416C01Rik-202

Summary

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Transcript: ENSMUST00000125960.2 5330416C01Rik-202

Summary

About Us

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