Transcript: ENSMUST00000062769.7 Cetn1-201

Description

centrin 1 [Source:MGI Symbol;Acc:MGI:1347086]

Location

Chromosome 18: 9,615,524-9,619,478 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 23 domains and features, is associated with 624 variant alleles and maps to 217 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000050996.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000062769.7	Cetn1-201	1247	172aa	ENSMUSP00000057392.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37731	P41209	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234003.2	Cetn1-202	1051	172aa	ENSMUSP00000157153.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37731	P41209	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000234590.2	Cetn1-203	1247	172aa	ENSMUSP00000157126.2	Nonsense mediated decay	CCDS37731	P41209	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,247 bps, Translation length: 172 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41209

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37731

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000062769.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000062769.7 Cetn1-201

Summary

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Transcript: ENSMUST00000062769.7 Cetn1-201

Summary

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