Transcript: ENSMUST00000235575.2 Ap5b1-203

Description

adaptor-related protein complex 5, beta 1 subunit [Source:MGI Symbol;Acc:MGI:2685808]

Gene Synonyms

Gm962

Location

Chromosome 19: 5,618,053-5,621,289 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 517 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000049562.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000096318.4	Ap5b1-201	3092	876aa	ENSMUSP00000094042.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29470	Q3TAP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000235575.2	Ap5b1-203	2785	876aa	ENSMUSP00000157737.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29470	Q3TAP4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000235542.2	Ap5b1-202	675	208aa	ENSMUSP00000157409.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B8Y9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,785 bps, Translation length: 876 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3TAP4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29470

Version

ENSMUST00000235575.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000235575.2 Ap5b1-203

Summary

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Transcript: ENSMUST00000235575.2 Ap5b1-203

Summary

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