Transcript: ENSMUST00000238163.2 Cfap58-202

Description

cilia and flagella associated protein 58 [Source:MGI Symbol;Acc:MGI:2685815]

Gene Synonyms

Ccdc147, LOC381229

Location

Chromosome 19: 47,926,114-47,932,787 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 1150 variant alleles and maps to 36 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000046585.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000066308.9	Cfap58-201	3353	873aa	ENSMUSP00000070533.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50466	B2RW38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238163.2	Cfap58-202	703	147aa	ENSMUSP00000158257.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BB06	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 703 bps, Translation length: 147 residues

Version

ENSMUST00000238163.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000238163.2 Cfap58-202

Summary

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Transcript: ENSMUST00000238163.2 Cfap58-202

Summary

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