Transcript: ENSMUST00000234115.2 Garem1-202

Description

GRB2 associated regulator of MAPK1 subtype 1 [Source:MGI Symbol;Acc:MGI:2685790]

Gene Synonyms

Fam59a, Garem, LOC381126

Location

Chromosome 18: 21,261,544-21,433,180 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 8579 variant alleles and maps to 235 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000042680.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000049260.7	Garem1-201	4923	876aa	ENSMUSP00000048914.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29091	Q3UFT3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234115.2	Garem1-202	4932	578aa	ENSMUSP00000157254.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3UFT3-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,932 bps, Translation length: 578 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UFT3

Version

ENSMUST00000234115.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000234115.2 Garem1-202

Summary

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Transcript: ENSMUST00000234115.2 Garem1-202

Summary

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