Transcript: ENSMUST00000225973.2 Mrps27-203

Description

mitochondrial ribosomal protein S27 [Source:MGI Symbol;Acc:MGI:1919064]

Gene Synonyms

2610028H14Rik

Location

Chromosome 13: 99,482,052-99,540,060 forward strand.

About this transcript

This transcript has 6 exons, is associated with 3807 variant alleles and maps to 52 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000041632.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000052249.7	Mrps27-201	1849	415aa	ENSMUSP00000062326.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26722	Q8BK72	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000224660.3	Mrps27-202	883	289aa	ENSMUSP00000156296.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P7I7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000225973.2	Mrps27-203	493	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 493 bps,

Version

ENSMUST00000225973.2

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000225973.2 Mrps27-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000225973.2 Mrps27-203

Summary

About Us

Get help

Our sister sites

Follow us