Description

deleted in primary ciliary dyskinesia [Source:MGI Symbol;Acc:MGI:1924407]

Location
Gene

This transcript is a product of gene ENSMUSG00000041035

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Dpcd-201ENSMUST000000470571345203 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29862Q8BPA8 NM_172639
NP_766227
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Dpcd-001ENSMUST00000161373653No protein
 
AntisenseGenes or transcripts that overlap any coding exon of a locus on the opposite strand. It also encompasses antisense regulation of a coding gene that have been reported in the literature.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 6 Coding exons: 6 Transcript length: 1,345 bps Translation length: 203 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29862

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BPA8

Transcript Support Level

1

Ensembl version

ENSMUST00000047057.7

Type

Known protein coding

Prediction Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays