Description

intraflagellar transport 172 [Source:MGI Symbol;Acc:MGI:2682064]

Location
About this transcript

This transcript has 48 exons, is annotated with 22 domains and features, is associated with 48 variations and maps to 70 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ift172-201ENSMUST0000004156554071749aaENSMUSP00000049335
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39054Q6VH22 NM_026298
NP_080574
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 48 Coding exons: 48 Transcript length: 5,407 bps Translation length: 1,749 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39054

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6VH22

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000041565.7

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays