Description

autophagy related 16-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924290]

Location
Gene

This transcript is a product of gene ENSMUSG00000026289

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Atg16l1-001ENSMUST000000275123130 bp607 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15136D3YZW7 Q8C0J2 NM_029846
NP_084122
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Atg16l1-002ENSMUST000001131903102 bp623 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56637D3YZW7 G9M4M6 Q8C0J2
NM_001205391
NP_001192320
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Atg16l1-011ENSMUST000001131863004 bp588 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56638D3YZW7 Q3TDQ5 Q8C0J2
NM_001205392
NP_001192321
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Atg16l1-008ENSMUST00000144047749 bp154 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YZW7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Atg16l1-004ENSMUST000001330723751 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Atg16l1-006ENSMUST000001278843400 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Atg16l1-003ENSMUST000001510373344 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Atg16l1-005ENSMUST000001346031674 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Atg16l1-007ENSMUST000001376381594 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Atg16l1-009ENSMUST00000129431640 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Atg16l1-010ENSMUST00000139628332 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 2 Coding exons: 0 Transcript length: 332 bps

Ensembl version

ENSMUST00000139628.1

Type

Known retained intron

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays