Description

contactin associated protein-like 1 [Source:MGI Symbol;Acc:MGI:1858201]

Gene

This transcript is a product of gene ENSMUSG00000017167

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Cntnap1-001ENSMUST0000010310954401385 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25455O54991 NM_016782
NP_058062
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Cntnap1-002ENSMUST00000138942664No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 24 Coding exons: 24 Transcript length: 5,440 bps Translation length: 1,385 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25455

Uniprot

This transcript corresponds to the following Uniprot identifiers: O54991

Transcript Support Level

1

Ensembl version

ENSMUST00000103109.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays