Description

Indian hedgehog [Source:MGI Symbol;Acc:MGI:96533]

Location
Gene

This transcript is a product of gene ENSMUSG00000006538

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Ihh-001ENSMUST000001640972468449 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15061P97812 Q80XI9 NM_010544
NP_034674
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Ihh-002ENSMUST000001893641385No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 3 Coding exons: 3 Transcript length: 2,468 bps Translation length: 449 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS15061

Uniprot

This transcript corresponds to the following Uniprot identifiers: P97812

Transcript Support Level

1

Ensembl version

ENSMUST00000164097.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays