Description

serine incorporator 2 [Source:MGI Symbol;Acc:MGI:1919132]

INSDC coordinates

chromosome:GRCm38:CM000997.2:130253495:130279205:1

About this gene

This gene has 5 transcripts (splice variants), 79 orthologues, 4 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Serinc2-002ENSMUST000001223741881395aaENSMUSP00000112535
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57301B2KFY0 NM_001253386
NP_001240315
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Serinc2-001ENSMUST000001059961878450aaENSMUSP00000101618
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51310Q8K0E7 NM_172702
NP_766290
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Serinc2-005ENSMUST000001201261452459aaENSMUSP00000113044
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q7Q6 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Serinc2-003ENSMUST00000146478802148aaENSMUSP00000115198
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B2KFY1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serinc2-004ENSMUST0000015484650682aaENSMUSP00000116586
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B2KFY2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays