Description

histone deacetylase 5 [Source:MGI Symbol;Acc:MGI:1333784]

INSDC coordinates

chromosome:GRCm38:CM001004.2:102194432:102230166:1

Transcripts

This gene has 20 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Hdac5-002ENSMUST000000089994269 bp1121 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS70320B7ZDF4 B7ZDF5 B7ZDF6
NM_001284248
NP_001271177
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hdac5-001ENSMUST000001071523788 bp1115 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36341B7ZDF4 B7ZDF6 Q3UJF1
Q6P9T4
NM_001077696
NM_010412
NP_001071164
NP_034542
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hdac5-019ENSMUST000001071503759 bp1102 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS70321B7ZDF4 B7ZDF6 B7ZDF7
NM_001284250
NP_001271179
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hdac5-003ENSMUST000001071514852 bp1030 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AWS5 B7ZDF4 B7ZDF6
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hdac5-009ENSMUST00000131254721 bp158 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7ZDF6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Hdac5-005ENSMUST00000156337692 bp175 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7ZDF4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Hdac5-018ENSMUST00000140962427 bp142 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7ZDF3 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Hdac5-007ENSMUST000001240773872 bp64 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RH93 NM_001284249
NP_001271178
Hdac5-004ENSMUST00000125072493 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Hdac5-006ENSMUST00000128686422 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Hdac5-020ENSMUST000001490875406 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-021ENSMUST000001509651008 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-014ENSMUST00000137787851 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-013ENSMUST00000140481814 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-015ENSMUST00000136304754 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-012ENSMUST00000155065695 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-010ENSMUST00000133651672 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-008ENSMUST00000150683650 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-011ENSMUST00000126453644 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hdac5-017ENSMUST00000145540537 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays