Description

tocopherol (alpha) transfer protein [Source:MGI Symbol;Acc:MGI:1354168]

Location
INSDC coordinates

chromosome:GRCm38:CM000997.2:20007938:20030785:1

Transcripts



This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Ttpa-201ENSMUST000000982443053278 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17995A8Y5N9 A8Y5P0 Q499J3
Q8BWP5
NM_015767
NP_056582
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Ttpa-001ENSMUST000001176323123262 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AIT6 A8Y5P0 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ttpa-002ENSMUST000001214912862209 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8Y5N9 A8Y5P0 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ttpa-003ENSMUST0000012579943691 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8Y5P0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays