Description

hydrogen voltage-gated channel 1 [Source:MGI Symbol;Acc:MGI:1921346]

INSDC coordinates

chromosome:GRCm38:CM000998.2:122206804:122242297:1

About this gene

This gene has 5 transcripts (splice variants), 61 orthologues, 1 paralogue and is a member of 3 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Hvcn1-002ENSMUST000001007472805269aaENSMUSP00000098312
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19644Q3U2S8 NM_028752
NP_083028
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Hvcn1-001ENSMUST000000726022790269aaENSMUSP00000072401
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19644Q3U2S8 NM_001042489
NP_001035954
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Hvcn1-004ENSMUST000001435601010168aaENSMUSP00000118013
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z019 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Hvcn1-003ENSMUST0000014585465747aaENSMUSP00000118151
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YZ46 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Hvcn1-005ENSMUST0000019618742742aaENSMUSP00000143483
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.

Gene-based displays