Description

zinc finger and BTB domain containing 18 [Source:MGI Symbol;Acc:MGI:1353609]

INSDC coordinates

chromosome:GRCm38:CM000994.2:177442351:177450764:1

About this gene

This gene has 12 transcripts (splice variants), 57 orthologues, 13 paralogues and is a member of 4 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Zbtb18-002ENSMUST000000772254944522aaENSMUSP00000076463
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15553Q9WUK6 NM_013915
NP_038943
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Zbtb18-001ENSMUST000000942764204531aaENSMUSP00000091831
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35800H7BX69 NM_001012330
NP_001012330
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Zbtb18-007ENSMUST000001956123790522aaENSMUSP00000141724
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15553Q9WUK6 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Zbtb18-009ENSMUST000001934803734236aaENSMUSP00000141663
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YWR6 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Zbtb18-012ENSMUST00000192851857229aaENSMUSP00000142256
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YY33 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Zbtb18-004ENSMUST00000195549646128aaENSMUSP00000142073
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YXP2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Zbtb18-011ENSMUST00000193440549138aaENSMUSP00000141337
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YW03 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Zbtb18-010ENSMUST00000195388525161aaENSMUSP00000141694
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YWT8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Zbtb18-003ENSMUST0000019500239445aaENSMUSP00000142124
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YXT0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Zbtb18-005ENSMUST0000019431933514aaENSMUSP00000141901
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YX98 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Zbtb18-006ENSMUST000001926992187aaENSMUSP00000141673
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Zbtb18-008ENSMUST00000194269100No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Gene-based displays