Description

peptidyl prolyl isomerase H [Source:MGI Symbol;Acc:MGI:106499]

INSDC coordinates

chromosome:GRCm38:CM000997.2:119300010:119320546:1

About this gene

This gene has 6 transcripts (splice variants), 40 orthologues, 9 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ppih-003ENSMUST000001063211288177aaENSMUSP00000101928
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18580Q4G0C5 Q9D868 NM_001110129
NP_001103599
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ppih-001ENSMUST00000106318800177aaENSMUSP00000101925
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18580Q4G0C5 Q9D868 NM_028677
NP_082953
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ppih-004ENSMUST00000056458757177aaENSMUSP00000051221
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18580Q4G0C5 Q9D868 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ppih-002ENSMUST00000106317613188aaENSMUSP00000101924
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51288Q9D868 NM_001110130
NP_001103600
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ppih-006ENSMUST00000147077725158aaENSMUSP00000118407
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2BGI8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Ppih-005ENSMUST00000106319622134aaENSMUSP00000101926
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2BGI9 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays