Description

serine (or cysteine) peptidase inhibitor, clade B, member 6a [Source:MGI Symbol;Acc:MGI:103123]

Location
INSDC coordinates

chromosome:GRCm38:CM001006.2:33917918:34002794:1

Transcripts

This gene has 17 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Serpinb6a-202ENSMUST000001671631654378 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26441E9PYY0 E9PZQ9 E9Q0P9
E9Q108 E9Q3Y1 E9Q4R2
E9Q6X2 K7E6F1 Q4FJQ6
Q60854
NM_001164118
NP_001157590
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Serpinb6a-001ENSMUST000000435521547378 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26441E9PYY0 E9PZQ9 E9Q0P9
E9Q108 E9Q3Y1 E9Q4R2
E9Q6X2 K7E6F1 Q4FJQ6
Q60854
NM_009254
NP_033280
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Serpinb6a-002ENSMUST000000171881504399 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS49228E9PYY0 E9PZQ9 E9Q0P9
E9Q108 E9Q3Y1 E9Q4R2
E9Q6X2 F8WIV2 K7E6F1
Q4FJQ6
NM_001164117
NP_001157589
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Serpinb6a-201ENSMUST000000765321504378 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26441E9PYY0 E9PZQ9 E9Q0P9
E9Q108 E9Q3Y1 E9Q4R2
E9Q6X2 K7E6F1 Q4FJQ6
Q60854
NM_001243192
NP_001230121
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Serpinb6a-007ENSMUST00000171034930228 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PYY0 E9PZQ9 E9Q0P9
E9Q108 E9Q3Y1 E9Q4R2
E9Q6X2 K7E6F1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-010ENSMUST00000167260892193 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PYY0 E9PZQ9 E9Q0P9
E9Q108 E9Q3Y1 E9Q4R2
E9Q6X2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-011ENSMUST00000171252833188 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PYY0 E9PZQ9 E9Q108
E9Q3Y1 E9Q4R2 E9Q6X2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-003ENSMUST00000168400783120 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PYY0 E9PZQ9 E9Q4R2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-014ENSMUST00000164627722144 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PYY0 E9PZQ9 E9Q3Y1
E9Q4R2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-013ENSMUST00000168350578162 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PYY0 E9PZQ9 E9Q3Y1
E9Q4R2 E9Q6X2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-005ENSMUST0000016635453668 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PZQ9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-006ENSMUST0000016723745718 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-012ENSMUST0000017099143773 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PZQ9 E9Q4R2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-008ENSMUST00000170620972No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-004ENSMUST00000167597663No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-015ENSMUST00000171951569No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Serpinb6a-009ENSMUST000001719852191No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays