Description

chromodomain helicase DNA binding protein 9 [Source:MGI Symbol;Acc:MGI:1924001]

Location
INSDC coordinates

chromosome:GRCm38:CM001001.2:90828835:91054508:1

About this gene

This gene has 2 transcripts (splice variants), 66 orthologues, 8 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Chd9-201ENSMUST00000048665115172869aaENSMUSP00000046356
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS22517Q8BUB9 Q8BYH8 NM_177224
NP_796198
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
Chd9-202ENSMUST00000109614115652885aaENSMUSP00000105243
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8BUB9 Q8BYH8 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website

Gene-based displays