Description

ligand dependent nuclear receptor interacting factor 1 [Source:MGI Symbol;Acc:MGI:2445214]

INSDC coordinates

chromosome:GRCm38:CM000996.2:106684987:106736577:1

Transcripts

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Lrif1-201ENSMUST000000987503357 bp755 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17726D3YVQ7 D3YWW6 D3Z005
D3Z1H3 G5E8M8 Q8CDD9
NM_001039488
NP_001034577
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Lrif1-001ENSMUST000001067361669 bp237 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17727G5E8M8 NM_001286685
NM_028081
NP_001273614
NP_082357
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Lrif1-006ENSMUST00000098751929 bp257 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38586G3X9P5 G5E8M8 NM_001039478
NP_001034567
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Lrif1-002ENSMUST000001313301912 bp601 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVQ7 D3YWW6 D3Z005
D3Z1H3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Lrif1-008ENSMUST00000130105674 bp178 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YWW6 D3Z005 D3Z1H3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Lrif1-009ENSMUST00000150513646 bp129 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z005 D3Z1H3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Lrif1-010ENSMUST00000154973578 bp124 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z005 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Lrif1-003ENSMUST000001270031989 bp539 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3YWW6 D3Z005 D3Z1H3
Q8CDD9
-
Lrif1-004ENSMUST000001067371411 bp372 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3YWW6 D3Z005 D3Z1H3
Q149J1
-
Lrif1-007ENSMUST00000156544672 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Lrif1-005ENSMUST000001229283138 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Lrif1-011ENSMUST00000150888720 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays