Description

collagen, type VIII, alpha 2 [Source:MGI Symbol;Acc:MGI:88464]

INSDC coordinates

chromosome:GRCm38:CM000997.2:126286793:126314330:1

Transcripts

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Col8a2-001ENSMUST000000701324332699 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18649A3KFY1 P25318 NM_199473
NP_955767
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Col8a2-002ENSMUST0000012843534357 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFY1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays