Description

protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:45378398:45435623:1

Transcripts

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Pcdh10-003ENSMUST0000017069582341040 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50902Q80TE2 Q8CC37 Q925I8
Q9CU33
NM_001098171
NP_001091641
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
Pcdh10-002ENSMUST0000017155472731047 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50901E9PX28 NM_001098172
NP_001091642
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pcdh10-001ENSMUST0000016612670811057 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50903E9PXQ7 NM_001098170
NP_001091640
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pcdh10-004ENSMUST000001932524638896 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3TZ28 Q6P0A6 NM_011043
NP_035173
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
Pcdh10-005ENSMUST00000195655634No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Gene-based displays