Description

collagen, type XXVII, alpha 1 [Source:MGI Symbol;Acc:MGI:2672118]

Location
INSDC coordinates

chromosome:GRCm38:CM000997.2:63214004:63334991:1

Transcripts

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Col27a1-001ENSMUST000000363007612 bp1845 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18250Q5QNQ9 NM_025685
NP_079961
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Col27a1-004ENSMUST000001840674281 bp943 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-V9GXJ0 -
Col27a1-007ENSMUST000001839133215 bp448 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-V9GXJ7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Col27a1-005ENSMUST000001519921485 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col27a1-003ENSMUST000001487514916 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Col27a1-002ENSMUST000001255044580 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Col27a1-006ENSMUST000001498564279 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays