Mouse (GRCm39)
Description

collagen, type XXVII, alpha 1 [Source:MGI Symbol;Acc:MGI:2672118]

Gene Synonyms

5730512J02Rik

Location

Chromosome 4: 63,132,241-63,253,228 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 7 transcripts (splice variants), 106 orthologues, 37 paralogues and is associated with 51 phenotypes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000036300.13Col27a1-20176121845aaENSMUSP00000043816.7
 
Protein coding
CCDS18250Q5QNQ9 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000184067.8Col27a1-2074281943aaENSMUSP00000139173.2
 
Nonsense mediated decay
V9GXJ0 TSL:5
ENSMUST00000183913.8Col27a1-2063215448aaENSMUSP00000139182.2
 
Nonsense mediated decay
V9GXJ7 TSL:1CDS 5' incomplete
ENSMUST00000151992.2Col27a1-2051485No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000148751.2Col27a1-2034916No protein-
 
Retained intron
-TSL:1
ENSMUST00000125504.8Col27a1-2024580No protein-
 
Retained intron
-TSL:1
ENSMUST00000149856.2Col27a1-2044279No protein-
 
Retained intron
-TSL:1