Description

BCL6 interacting corepressor [Source:MGI Symbol;Acc:MGI:1918708]

Location
INSDC coordinates

chromosome:GRCm38:CM001013.2:12036740:12160355:1

About this gene

This gene has 7 transcripts (splice variants), 71 orthologues, 7 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Bcor-001ENSMUST0000011551369411759aaENSMUSP00000111175
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS40873F6XPR4 F7BEN2 Q8CGN4
NM_029510
NP_083786
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
Bcor-002ENSMUST0000011551268871741aaENSMUSP00000111174
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS40872F6XPR4 F7BEN2 Q8CGN4
NM_175044
NP_778209
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Bcor-003ENSMUST0000006514368391725aaENSMUSP00000068618
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30021F6XPR4 F7BEN2 Q8CGN4
NM_175045
NP_778210
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Bcor-004ENSMUST0000012403367851707aaENSMUSP00000116258
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30022F6XPR4 F7BEN2 Q8CGN4
NM_175046
NP_778211
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Bcor-005ENSMUST0000004344161131707aaENSMUSP00000048024
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30022F6XPR4 F7BEN2 Q8CGN4
NM_001168321
NP_001161793
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Bcor-006ENSMUST00000145872573125aaENSMUSP00000122829
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6XPR4 F7BEN2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Bcor-007ENSMUST0000012300445695aaENSMUSP00000120046
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6XPR4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays