Description

interphotoreceptor matrix proteoglycan 1 [Source:MGI Symbol;Acc:MGI:1926876]

Location
INSDC coordinates

chromosome:GRCm38:CM001002.2:80313330:80465481:1

About this gene

This gene has 3 transcripts (splice variants), 77 orthologues, 1 paralogue and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Impg1-001ENSMUST000001132502965798aaENSMUSP00000108876
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57685Q8R1W8 NM_022016
NP_071299
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Impg1-201ENSMUST000000852893356721aaENSMUSP00000082395
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8R1W8 Z4YNB5 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Impg1-002ENSMUST00000185068796216aaENSMUSP00000139151
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8R1W8 Z4YNB5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays