Gene: Calcb ENSMUSG00000030666

Description

calcitonin-related polypeptide, beta [Source:MGI Symbol;Acc:MGI:2151254]

Gene Synonyms

CGRP2, Calc2

Location

Chromosome 7: 114,317,878-114,322,600 forward strand.

GRCm39:CM001000.3

About this gene

This gene has 3 transcripts (splice variants), 250 orthologues, 2 paralogues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000182816.2	Calcb-203	706	156aa	ENSMUSP00000138713.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R2N3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000032902.11	Calcb-201	962	130aa	ENSMUSP00000032902.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21764	Q3UW96	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000182044.2	Calcb-202	386	51aa	ENSMUSP00000138590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R2C5	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: Calcb ENSMUSG00000030666

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Gene: Calcb ENSMUSG00000030666

Summary

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