Description

spindle assembly 6 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1920026]

INSDC coordinates

chromosome:GRCm38:CM000996.2:116594982:116631004:1

About this gene

This gene has 8 transcripts (splice variants), 70 orthologues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Sass6-006ENSMUST000001973352458619aaENSMUSP00000143123
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sass6-001ENSMUST000001983112404654aaENSMUSP00000143233
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_028349
NP_082625
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Sass6-004ENSMUST000001983861894560aaENSMUSP00000143175
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sass6-002ENSMUST00000029571434066aaENSMUSP00000029571
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q80UK7 NM_001289568
NM_001289571
NP_001276497
NP_001276500
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Sass6-008ENSMUST00000196619697No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Sass6-005ENSMUST00000198514357No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Sass6-003ENSMUST000001987471765No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Sass6-007ENSMUST00000197063539No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---

Gene-based displays