Description

ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 [Source:MGI Symbol;Acc:MGI:1261437]

Location
INSDC coordinates

chromosome:GRCm38:CM000995.2:10056016:10080510:1

About this gene

This gene has 7 transcripts (splice variants), 73 orthologues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Atp5c1-003ENSMUST000001148961735274aaENSMUSP00000110546
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50497A2AKV0 A2AKV1 A2AKV2
A2AKV3 Q8C2Q8
NM_001112738
NP_001106209
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Atp5c1-001ENSMUST000001148971166298aaENSMUSP00000110547
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38045A2AKU9 A2AKV0 A2AKV1
A2AKV2 A2AKV3 Q3UD06
Q8C2Q8 Q91VR2
NM_020615
NP_065640
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
Atp5c1-002ENSMUST000000268871060297aaENSMUSP00000026887
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AKU9 A2AKV0 A2AKV1
A2AKV2 A2AKV3
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Atp5c1-005ENSMUST000001455301000188aaENSMUSP00000116508
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AKV0 A2AKV1 A2AKV2
A2AKV3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Atp5c1-007ENSMUST00000153554770171aaENSMUSP00000116368
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AKV0 A2AKV1 A2AKV2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Atp5c1-006ENSMUST00000130067690101aaENSMUSP00000117182
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AKV0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Atp5c1-004ENSMUST00000139810635154aaENSMUSP00000123100
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AKV0 A2AKV1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays